Host RAM OOM-Kill of DataLoader Workers Misread as GPU OOM
The kernel oom-killer (or cgroup limit) kills python workers whose RSS grew unbounded. Shard caches, tokenized-in-RAM datasets, prefetch queues. Surface strings ("Out of memory", "Killed") route engineers to GPU OOM playbooks that cannot help.
The kernel oom-killer (or cgroup limit) kills python workers whose RSS grew unbounded. Shard caches, tokenized-in-RAM datasets, prefetch queues.
- Symptom
no torch.cuda.OutOfMemoryError anywhere- Root cause
- unbounded in-worker cache (dict/LRU without cap). copy-on-write defeated by python refcounting on forked datasets. rank0 auxiliary services inflating one pod.
- Recommended fix
- Identify HOST oom via dmesg/journal (anon-rss line) and memory.peak of the cgroup
- How Denpex helps
- Denpex investigates Host RAM OOM-Kill of DataLoader Workers Misread as GPU OOM using the evidence you provide or your connected workload collects. Earlier rank, host or application evidence is needed to distinguish an initiating failure from a downstream report.
What this failure is
Host RAM OOM-Kill of DataLoader Workers Misread as GPU OOM is a Memory failure seen during ML training runs. The kernel oom-killer (or cgroup limit) kills python workers whose RSS grew unbounded. Shard caches, tokenized-in-RAM datasets, prefetch queues. Surface strings ("Out of memory", "Killed") route engineers to GPU OOM playbooks that cannot help. Common tags: Host Oom, Oom Killer, Dataloader, Cgroup.
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Why it happens (the mechanism)
Unbounded in-worker cache (dict/LRU without cap). Copy-on-write defeated by python refcounting on forked datasets. Rank0 auxiliary services inflating one pod. Taken together, these mechanisms explain why the failure is reproducible, why it tends to surface on specific workloads or scales, and why generic mitigation attempts often fall short without addressing the underlying cause.
What you'll observe
- DataLoader worker (pid N) is killed by signal: Killed
- kernel: Out of memory: Killed process (python3) with huge anon-rss
- GPU memory never near capacity at kill time
Common symptoms and what they mean
| Symptom | Why it happens |
|---|---|
| exitcode -9 on a worker; torchrun ChildFailedError wrapper | unbounded in-worker cache (dict/LRU without cap) |
| RSS staircase growth per epoch in node metrics | copy-on-write defeated by python refcounting on forked datasets |
| no torch.cuda.OutOfMemoryError anywhere | rank0 auxiliary services inflating one pod |
Which systems are affected
- num_workers>0 pipelines with per-worker caches
- pin_memory with large prefetch_factor
- k8s pods with tight memory limits
How to confirm this is the problem
Use this checklist to test the hypothesis against a small reproduction. No single line proves the root cause, so preserve the preceding events and compare one variable at a time.
- ✓Reproduce the failure from a clean checkpoint/seed: the symptom must appear without warm-up state from a previous run.
- ✓Verified signal present: exitcode -9 on a worker; torchrun ChildFailedError wrapper
- ✓Verified signal present: RSS staircase growth per epoch in node metrics
- ✓Verified signal present: no torch.cuda.OutOfMemoryError anywhere
- ✓A targeted fix from the "How to fix it" section eliminates or substantially reduces the symptom within one validation pass.
Root cause
- unbounded in-worker cache (dict/LRU without cap)
- copy-on-write defeated by python refcounting on forked datasets
- rank0 auxiliary services inflating one pod
The fix and how to prevent it
Searchable error signature
no torch.cuda.OutOfMemoryError anywhere
kernel: Out of memory: Killed process (python3) with huge anon-rssUse this text as a lookup key in logs and upstream issue trackers. It is not presented as a captured customer log. Confirm the cause from your own preceding events, versions, configuration and the cited references.
The fix and the prevention pattern
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Diagnose this failure in VS Code
Select the traceback or open the failed terminal, then run Denpex locally to see the initiating rank, collateral failures, exact fix, and verification command without uploading the log.
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Don't just read the fix, diagnose your run
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