Skip to content

DeepSpeed FastFileWriter File Descriptor Leak, Phantom ENOSPC

DeepSpeed's FastFileWriter leaks file descriptors during checkpoint saves, eventually causing 'No space left on device' (ENOSPC) errors even when disk space is available. The leaked file descriptors exhaust the per-process fd limit, making the filesystem appear full. Denpex detects the fd leak pattern from ENOSPC errors with available disk space.

Quick answer

DeepSpeed's FastFileWriter leaks file descriptors during checkpoint saves, eventually causing 'No space left on device' (ENOSPC) errors even when disk space is available.

Symptom
OSError: [Errno 28] No space left on device when saving checkpoints
Root cause
FastFileWriter opens checkpoint files for writing but doesn't close them after the write completes. Each checkpoint save opens new file descriptors without closing the previous ones. After enough saves, the per-process file descriptor limit (ulimit -n, typically 1024 or 65536) is exceeded.
Recommended fix
Upgrade DeepSpeed to v0.14.3+ which includes the FastFileWriter fd leak fix
How Denpex helps
Denpex investigates DeepSpeed FastFileWriter File Descriptor Leak, Phantom ENOSPC using the evidence you provide or your connected workload collects. Earlier rank, host or application evidence is needed to distinguish an initiating failure from a downstream report.
Data Integrity#deepspeed#fd-leak#enospc#file-descriptor#checkpoint#fastfilewriter

What this failure is

DeepSpeed FastFileWriter File Descriptor Leak. Phantom ENOSPC is a Data Integrity failure seen during ML training runs. DeepSpeed's FastFileWriter leaks file descriptors during checkpoint saves, eventually causing 'No space left on device' (ENOSPC) errors even when disk space is available. The leaked file descriptors exhaust the per-process fd limit, making the filesystem appear full. Denpex detects the fd leak pattern from ENOSPC errors with available disk space. Common tags: Deepspeed, Fd Leak, Enospc, File Descriptor.

Live diagnosis, no signup

Is this what broke your run? Paste your log.

You're reading about DeepSpeed FastFileWriter File Descriptor Leak, Phantom ENOSPC. Paste your own traceback and relevant evidence for an investigation of your workload, with a next action or a specific missing fact. A reference entry does not establish your cause. No account or card for the free diagnosis. Review data handling before submitting sensitive logs.

Before uploading, review cloud data handling and local options.

training_logs.txt
No log to hand? Try one:

Upload your log file. Large files are processed in your browser. Only selected evidence is submitted when you run diagnosis.

3 free diagnoses/day

Why it happens (the mechanism)

FastFileWriter opens checkpoint files for writing but doesn't close them after the write completes. Each checkpoint save opens new file descriptors without closing the previous ones. After enough saves, the per-process file descriptor limit (ulimit -n, typically 1024 or 65536) is exceeded. The OS returns ENOSPC because the filesystem can't allocate new inodes or directory entries when fd limits are hit. Taken together, these mechanisms explain why the failure is reproducible, why it tends to surface on specific workloads or scales, and why generic mitigation attempts often fall short without addressing the underlying cause.

What you'll observe

  • Training fails with 'No space left on device' but df shows plenty of free space
  • The error occurs after many checkpoint saves, not at the beginning
  • lsof shows thousands of open file descriptors for checkpoint files that should have been closed

Common symptoms and what they mean

SymptomWhy it happens
OSError: [Errno 28] No space left on device when saving checkpointsFastFileWriter opens checkpoint files for writing but doesn't close them after the write completes
df -h shows ample free space on the checkpoint storageEach checkpoint save opens new file descriptors without closing the previous ones
lsof -p <pid> | wc -l shows file descriptor count near the ulimit -n limitAfter enough saves, the per-process file descriptor limit (ulimit -n, typically 1024 or 65536) is exceeded
The error occurs after a specific number of checkpoint saves (consistent across runs)The OS returns ENOSPC because the filesystem can't allocate new inodes or directory entries when fd limits are hit

Which systems are affected

  • DeepSpeed ZeRO-3 with frequent checkpoint saves
  • DeepSpeed with NVMe offload and FastFileWriter
  • Long-running training jobs with many checkpoint iterations
  • DeepSpeed versions before v0.14.3

How to confirm this is the problem

Use this checklist to test the hypothesis against a small reproduction. No single line proves the root cause, so preserve the preceding events and compare one variable at a time.

  • ✓Reproduce the failure from a clean checkpoint/seed: the symptom must appear without warm-up state from a previous run.
  • ✓Verified signal present: OSError: [Errno 28] No space left on device when saving checkpoints
  • ✓Verified signal present: df -h shows ample free space on the checkpoint storage
  • ✓Verified signal present: lsof -p <pid> | wc -l shows file descriptor count near the ulimit -n limit
  • ✓Verified signal present: The error occurs after a specific number of checkpoint saves (consistent across runs)
  • ✓A targeted fix from the "How to fix it" section eliminates or substantially reduces the symptom within one validation pass.

Root cause

  • FastFileWriter opens checkpoint files for writing but doesn't close them after the write completes
  • Each checkpoint save opens new file descriptors without closing the previous ones
  • After enough saves, the per-process file descriptor limit (ulimit -n, typically 1024 or 65536) is exceeded
  • The OS returns ENOSPC because the filesystem can't allocate new inodes or directory entries when fd limits are hit

The fix and how to prevent it

Searchable error signature

search key
OSError: [Errno 28] No space left on device when saving checkpoints

Use this text as a lookup key in logs and upstream issue trackers. It is not presented as a captured customer log. Confirm the cause from your own preceding events, versions, configuration and the cited references.

The fix and the prevention pattern

The root cause is on this page and stays free. A free account adds the exact remediation steps, saved history, and the fix on every entry in the encyclopedia.

Sign up free. Unlock the full analysis

No credit card. Daily allowance follows verified trust tier. Instant access.

Diagnose this failure in VS Code

Select the traceback or open the failed terminal, then run Denpex locally to see the initiating rank, collateral failures, exact fix, and verification command without uploading the log.

Install the free VS Code extension

DeepSpeed errors in context

DeepSpeed changes when parameters, gradients and optimizer state are created, partitioned, gathered and offloaded. The hub separates ZeRO, memory, checkpoint and pipeline failures by lifecycle phase.

Compare every deepspeed error side by side

Don't just read the fix, diagnose your run

The encyclopedia tells you what went wrong. Denpex tells you what went wrong in YOUR training run. With your logs, your config, and your stack.