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PyTorch CUDA Memory Fragmentation

The PyTorch caching allocator reserves large blocks of memory and splits them for individual tensor allocations. Over time, memory becomes fragmented into many small blocks, preventing the allocation of a new contiguous large block, even if the total free memory across all small blocks is sufficient.

Quick answer

The PyTorch caching allocator reserves large blocks of memory and splits them for individual tensor allocations.

Symptom
RuntimeError: CUDA out of memory. Tried to allocate .* MiB .* .* GiB reserved in total by PyTorch
Root cause
The PyTorch caching allocator reserves large blocks of memory and splits them for individual tensor allocations. Over time, memory becomes fragmented into many small blocks, preventing the allocation of a new contiguous large block, even if the total free memory across all small blocks is sufficient.
Recommended fix
PYTORCH_CUDA_ALLOC_CONF=max_split_size_mb:128
How Denpex helps
Denpex investigates PyTorch CUDA Memory Fragmentation using the evidence you provide or your connected workload collects. Earlier rank, host or application evidence is needed to distinguish an initiating failure from a downstream report.
Memory#Fragmentation

What this failure is

PyTorch CUDA Memory Fragmentation is a Memory failure seen during ML training runs. The PyTorch caching allocator reserves large blocks of memory and splits them for individual tensor allocations. Over time, memory becomes fragmented into many small blocks, preventing the allocation of a new contiguous large block, even if the total free memory across all small blocks is sufficient. Common tags: Fragmentation.

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Why it happens (the mechanism)

Users see 'CUDA out of memory' and assume their model/batch size is too large for the GPU. However, the total capacity and free memory numbers in the error message actually show that the physical memory exists, but it is too fragmented to allocate a contiguous block.

What you'll observe

  • RuntimeError: CUDA out of memory. Tried to allocate .* MiB .* .* GiB reserved in total by PyTorch
  • reserved memory is >> allocated memory

Common symptoms and what they mean

SymptomWhy it happens
CUDA OOM exception thrown even when nvidia-smi shows plenty of total free GPU memory.The PyTorch caching allocator reserves large blocks of memory and splits them for individual tensor allocations. Over time, memory becomes fragmented into many small blocks, preventing the allocation of a new contiguous large block, even if the total free memory across all small blocks is sufficient.
The error message shows that 'reserved' memory is much larger than 'allocated' memory.The PyTorch caching allocator reserves large blocks of memory and splits them for individual tensor allocations. Over time, memory becomes fragmented into many small blocks, preventing the allocation of a new contiguous large block, even if the total free memory across all small blocks is sufficient.

Which systems are affected

  • PyTorch
  • CUDA

How to confirm this is the problem

Use this checklist to test the hypothesis against a small reproduction. No single line proves the root cause, so preserve the preceding events and compare one variable at a time.

  • ✓Check the PyTorch OOM error message and compare 'allocated' vs 'reserved' memory.
  • ✓Run torch.cuda.memory_summary() to inspect the allocator state and see the distribution of block sizes.

Root cause

  • The PyTorch caching allocator reserves large blocks of memory and splits them for individual tensor allocations. Over time, memory becomes fragmented into many small blocks, preventing the allocation of a new contiguous large block, even if the total free memory across all small blocks is sufficient.

The fix and how to prevent it

Searchable error signature

search key
RuntimeError: CUDA out of memory. Tried to allocate .* MiB .* .* GiB reserved in total by PyTorch
CUDA OOM exception thrown even when nvidia-smi shows plenty of total free GPU memory.

Use this text as a lookup key in logs and upstream issue trackers. It is not presented as a captured customer log. Confirm the cause from your own preceding events, versions, configuration and the cited references.

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CUDA errors in context

CUDA reports errors asynchronously, so the traceback usually points at whatever line synchronised next rather than the one at fault. The hub covers every common CUDA error and how to make it report honestly.

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