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FSDP Mismatched Tensor Shapes Triggering NCCL Hang

In FSDP, dynamic input shapes or uneven batch sizes across ranks can lead to mismatched tensor sizes during the AllGather operation for gradients or model parameters. NCCL expects the collective operation to use exact matching sizes across all ranks; otherwise, it hangs waiting for the expected byte count.

Quick answer

In FSDP, dynamic input shapes or uneven batch sizes across ranks can lead to mismatched tensor sizes during the AllGather operation for gradients or model parameters.

Symptom
RuntimeError: NCCL error in: /pytorch/torch/lib/c10d/ProcessGroupNCCL.cpp
Root cause
In FSDP, dynamic input shapes or uneven batch sizes across ranks can lead to mismatched tensor sizes during the AllGather operation for gradients or model parameters. NCCL expects the collective operation to use exact matching sizes across all ranks; otherwise, it hangs waiting for the expected byte count.
Recommended fix
Pad inputs to uniform lengths or use Join context from torch.distributed.algorithms.join import Join Ensuring all ranks process the exact same tensor shapes prevents NCCL from hanging due to size mismatches.
How Denpex helps
Denpex matches FSDP Mismatched Tensor Shapes Triggering NCCL Hang across every rank in a distributed run and reports which rank failed first, so you act on the initiating node instead of the loudest one.
Model#NCCL Timeout

What this failure is

FSDP Mismatched Tensor Shapes Triggering NCCL Hang is a Model failure seen during ML training runs. In FSDP, dynamic input shapes or uneven batch sizes across ranks can lead to mismatched tensor sizes during the AllGather operation for gradients or model parameters. NCCL expects the collective operation to use exact matching sizes across all ranks; otherwise, it hangs waiting for the expected byte count. Common tags: NCCL Timeout.

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Why it happens (the mechanism)

The timeout happens deep in NCCL during an implicitly triggered FSDP collective, not an explicit user call. The user is unaware an AllGather was even happening.

What you'll observe

  • Watchdog caught collective operation timeout: WorkNCCL(SeqNum=..., OpType=ALLGATHER
  • RuntimeError: NCCL error in: /pytorch/torch/lib/c10d/ProcessGroupNCCL.cpp

Common symptoms and what they mean

SymptomWhy it happens
Training hangs specifically during the backward pass or optimizer step when using Fully Sharded Data Parallel (FSDP).In FSDP, dynamic input shapes or uneven batch sizes across ranks can lead to mismatched tensor sizes during the AllGather operation for gradients or model parameters. NCCL expects the collective operation to use exact matching sizes across all ranks; otherwise, it hangs waiting for the expected byte count.
The hang occurs reliably at the same point (e.g., first iteration of an epoch where variable sequence length is introduced).In FSDP, dynamic input shapes or uneven batch sizes across ranks can lead to mismatched tensor sizes during the AllGather operation for gradients or model parameters. NCCL expects the collective operation to use exact matching sizes across all ranks; otherwise, it hangs waiting for the expected byte count.

Which systems are affected

  • PyTorch FSDP
  • NCCL

How to confirm this is the problem

Use this checklist to test the hypothesis against a small reproduction. No single line proves the root cause, so preserve the preceding events and compare one variable at a time.

  • Log batch sizes and input shapes on each rank right before the forward pass.
  • Enable `TORCH_DISTRIBUTED_DEBUG=DETAIL` to catch shape mismatches before they hit NCCL.

Searchable error signature

search key
RuntimeError: NCCL error in: /pytorch/torch/lib/c10d/ProcessGroupNCCL.cpp
Watchdog caught collective operation timeout: WorkNCCL(SeqNum=..., OpType=ALLGATHER

Use this text as a lookup key in logs and upstream issue trackers. It is not presented as a captured customer log. Confirm the cause from your own preceding events, versions, configuration and the cited references.

The fix and the prevention pattern

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NCCL errors in context

NCCL is where a distributed job reports failure, which is not the same as where it failed. The hub lists every common NCCL error next to what it actually indicates, and the environment variables that tell them apart.

Compare every nccl error side by side

Root cause

  • In FSDP, dynamic input shapes or uneven batch sizes across ranks can lead to mismatched tensor sizes during the AllGather operation for gradients or model parameters. NCCL expects the collective operation to use exact matching sizes across all ranks; otherwise, it hangs waiting for the expected byte count.

The fix and how to prevent it

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